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Getting started with gpmapr14 days ago
Introduction | Getting started | Understanding info | Variant search returns proxy variants | Diving in | Trait example | How study_extractions, coloc_groups, and rare_results relate | Gene example | Coloc pairs example | Target–indication prioritisation workflow: Alzheimer's disease | Step 1: Genes mapped to Alzheimer's disease | Step 2: Rank by gene-level pleiotropy | Step 3: Variant-level specificity and consistency across variants and rare results | Diving deeper: TREM2 | Putting it together | Accessing summary statistics
GPMap tutorial: GWAS upload14 days ago
Uploading a GWAS | Fetching your results | Interpreting your results | Your upload's rows and everyone else's | Comparing your upload with another trait | Deleting an upload
GPMap tutorial: Haemoglobin concentration case study14 days ago
Trait colocalisations | Genome view | Complex trait colocalisations | Investigating a specific colocalisation group | TMPRSS6: eQTL/mQTL/sQTL and physiological measures | Region plot: scaled LBF values across all studies in the coloc group | Trait clustering